Projects
Benchmarking 4 AI Models On A Custom PepPI Dataset
Assembling four different ML/DL models to compare performance on identifying peptide-protein binding sites.
How I Built A Custom Protein-Binding Dataset for Machine Learning
A walkthrough on building an ML-friendly dataset with code, data visualizations, and cited sources.
Hyperjudge: Source-checking tool for doc validity
A web app that checks the validity of linked sources in documents and webpages.
Predicting the Effect of Mutations on PPIs Using AlphaFold
How I used AlphaFold-Multimer, XGBoost, and 47,000 SLURM jobs to predict PPI outcomes with 91% AUC
VICI: in silico controls for PPI variants
An open source command line tool to find P/LP and B/LB controls to test AF-M using PIONEER.
DAMIA: Disease-Associated Missense Interactome Analysis
Pipeline and command line utility for analyzing missense variant protein-protein interfaces in silico.
Posts
How to Win a Case Competition in 7 Hours
Competing in and winning my first ever business innovation case competition.
Interview with UWaterloo About International Co-op
Got to do a profile for my University Science & Business department about doing computational chemistry research in Singapore.
Getting Featured by UWaterloo for AI Research at SickKids
My briliant friend Kritika and I got to chat about doing AI research at SickKids.
Co-authorship in Nature Genetics with SickKids
Part of my work at SickKids contributed to a research paper in Nature.